Job Description A0AV96 Confidence 99.89% Date Fri May 25 09:48:37 BST 2012 Rank 16 Aligned Residues 160 % Identity 26% Template c1b7fA_ PDB info PDB header:rna-binding protein/rna Chain: A: PDB Molecule:protein (sxl-lethal protein); PDBTitle: sxl-lethal protein/rna complex Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C	S
Query Conservation																																								.
Alig confidence																																								.																																.
Template Conservation																																																																								.
Template Sequence		S	N	T	N	L	I	V	N	Y	L	P	Q	D	M	T	D	R	E	L	Y	A	L	F	R	A	I	G	P	I	N	T	C	R	I	M	R	D	Y	K	T	G	Y	S	Y	G	Y	A	F	V	D	F	T	S	E	M	D	S	Q	R	A	I	K	V	L	N	G	I	T	V	R	.	N	K	R	L	K	V	S	Y	A
Template Known Secondary structure				S									T	T												T	T	S											T	T	T	T				S							S	S												T	T				T	.	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.
		148	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		V	D	N	C	.	.	.	.	.	.	R	L	F	I	G	G	I	P	K	M	K	K	R	E	E	I	L	E	E	I	A	K	V	T	E	G	V	L	D	V	I	V	Y	A	S	A	A	D	K	M	K	N	R	G	F	A	F	V	E	Y	E	S	H	R	A	A	A	M	A	R	R	K	L	M	P	G	R	I	Q	L
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																						.	.
Template Conservation																																																	.	.
Template Sequence		R	P	G	G	E	S	I	K	D	T	N	L	Y	V	T	N	L	P	R	T	I	T	D	D	Q	L	D	T	I	F	G	K	Y	G	S	I	V	Q	K	N	I	L	R	D	K	L	T	.	.	G	R	P	R	G	V	A	F	V	R	Y	N	K	R	E	E	A	Q	E	A	I	S	A	L	N	N	V	I	P	E	G
Template Known Secondary structure					S	S	T	T	T	T							S			T	T											T	S	S	S											T	T	T	.	.												S	S												T	T				T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	H	Q	I	A	V	D	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	Q	P	L	S	V	R	L	A
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions