Return to main results Retrieve Phyre Job Id

Job DescriptionP08100
Confidence3.81%DateWed Jun 6 09:21:49 BST 2012
Rank34Aligned Residues12
% Identity17%Templated1u5ta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.
Predicted Secondary structure 
Query SS confidence 











Query Sequence  NKQFRNCMLTTI
Query Conservation     

      
Alig confidence 











Template Conservation 

 

  
  

Template Sequence  SPEFRSKFMHMC
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 











   57..60........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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