Job Description P08100 Confidence 100.00% Date Wed Jun 6 09:21:49 BST 2012 Rank 23 Aligned Residues 276 % Identity 16% Template c4ea3A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:fusion protein of nociceptin receptor and cytochrome b562; PDBTitle: structure of the n/ofq opioid receptor in complex with a peptide2 mimetic Resolution 3.01 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	W	Q	F	S	M	L	A	A	Y	M	F	L	L	I	V	L	G	F	P	I	N	F	L	T	L	Y	V	T	V	Q	H	K	K	L	R	T	P	L	N	Y	I	L	L	N	L	A	V	A	D	L	F	M	V	L	G	G	F	T	S	T	L	Y	T	S	L	H	G	Y	F	V	F	G	P	T	G	C	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	G	L	K	V	T	I	V	G	L	Y	L	A	V	C	V	G	G	L	L	G	N	C	L	V	M	Y	V	I	L	R	H	T	K	M	K	T	A	T	N	I	Y	I	F	N	L	A	L	A	D	T	L	V	L	L	T	L	P	F	Q	G	T	D	I	L	L	G	F	W	P	F	G	N	A	L	C	K	T	V
Template Known Secondary structure																																	T	T		S																					T	T											T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	F	F	A	T	L	G	G	E	I	A	L	W	S	L	V	V	L	A	I	E	R	Y	V	V	V	C	K	P	M	S	N	F	R	F	G	E	N	H	A	I	M	G	V	A	F	T	W	V	M	A	L	A	C	A	A	P	P	L	A	G	W	S	R	Y	I	P	E	G	L	Q	C	S	C	G	I	D	Y	Y
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		I	A	I	D	Y	Y	N	M	F	T	S	T	F	T	L	T	A	M	S	V	D	R	Y	V	A	I	C	H	P	T	S	S	K	A	Q	A	V	.	.	.	.	.	.	.	.	.	N	V	A	I	W	A	L	A	S	V	V	G	V	P	V	A	I	M	G	S	A	Q	V	E	D	E	E	I	E	C	L	V	E	I
Template Known Secondary structure																																							.	.	.	.	.	.	.	.	.																									S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	P	E	V	N	N	E	S	F	V	I	Y	M	F	V	V	H	F	T	I	P	M	I	I	I	F	F	C	Y	G	Q	L	V	F	T	V	K	E	A	A	A	Q	Q	Q	E	S	A	T	T	Q	K	A	E	K	E	V	T	R	M	V	I	I	M	V	I	A	F	L	I	C	W	V	P	Y	A	S	V	A
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		P	T	P	Q	D	Y	W	G	P	V	F	A	I	C	I	F	L	F	S	F	I	V	P	V	L	V	I	S	V	C	Y	S	L	M	I	R	R	L	R	G	.	V	R	L	L	S	G	S	R	E	K	D	R	N	L	R	R	I	T	R	L	V	L	V	V	V	A	V	F	V	G	C	W	T	P	V	Q	V	F	V
Template Known Secondary structure			S	S																	T																			T	T	.		S	S		S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		273	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		F	Y	I	F	T	H	Q	G	S	N	.	.	F	G	P	I	F	M	T	I	P	A	F	F	A	K	S	A	A	I	Y	N	P	V	I	Y	I	M	M	N	K	Q	F	R	N	C	M	L
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		L	A	Q	G	L	G	V	Q	P	S	S	E	T	A	V	A	I	L	R	F	C	T	A	L	G	Y	V	N	S	C	L	N	P	I	L	Y	A	F	L	D	E	N	F	K	A	C	F	R
Template Known Secondary structure						T	T					S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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