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Job DescriptionP08100
Confidence100.00%DateWed Jun 6 09:21:49 BST 2012
Rank12Aligned Residues287
% Identity19%Templatec3sn6R_
PDB info PDB header:signaling protein/hydrolaseChain: R: PDB Molecule:lysozyme, beta-2 adrenergic receptor; PDBTitle: crystal structure of the beta2 adrenergic receptor-gs protein complex
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
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Query Sequence  YLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTG
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Template Sequence  TWDAEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFW
Template Known Secondary structure  SS




GGG

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   1157..1160.........1170.........1180.........1190.........1200.........1210.........1220.........1230......
 
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Query Sequence  CNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR. FGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCG
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Template Sequence  CEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRQEAINCYAEE
Template Known Secondary structure  S

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   106...110.........120.........130.........140.........150.........160.........170.........180.....
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  IDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPY
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Template Sequence  TCCDFFTN. . . . QAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRCLKEHKALKTLGIIMGTFTLCWLPF
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   189190...... ...200.........210.........220.........230.........240.........250.........260....
 
   269270.........280.........290.........300.........310.........320..
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Query Sequence  ASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTIC
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Template Sequence  FIVNIVHVIQDNL. IRKEVYILLNWIGYVNSGFNPLIYC. RSPDFRIAFQELLC
Template Known Secondary structure  STTS.S
T.T
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   290.........300.. .......310.........320....... ..330.........340.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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