Job Description P08100 Confidence 100.00% Date Wed Jun 6 09:21:49 BST 2012 Rank 25 Aligned Residues 221 % Identity 18% Template c3kj6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:beta-2 adrenergic receptor; PDBTitle: crystal structure of a methylated beta2 adrenergic receptor-2 fab complex Resolution 3.40 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	Y	M	F	L	L	I	V	L	G	F	P	I	N	F	L	T	L	Y	V	T	V	Q	H	K	K	L	R	T	P	L	N	Y	I	L	L	N	L	A	V	A	D	L	F	M	V	L	G	G	F	T	S	T	L	Y	T	S	L	H	G	Y	F	V	F	G	P	T	G	C	N	L	E	G	F	F	A	T	L
Query Conservation
Alig confidence																									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	I	V	M	S	L	I	V	L	A	I	V	F	G	N	V	L	V	I	T	A	I	.	A	F	E	R	L	Q	T	V	T	N	Y	F	I	T	S	L	A	C	A	D	L	V	M	G	L	A	V	V	P	F	G	A	F	W	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	D	V	L
Template Known Secondary structure						T										T	T								.			G	G	G									T												T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	I	A	L	W	S	L	V	V	L	A	I	E	R	Y	V	V	V	C	K	P	M	S	N	F	R	F	G	E	N	H	A	I	M	G	V	A	F	T	W	V	M	A	L	A	C	A	A	P	P	L	A	G	W	S	R	Y	I	P	E	G	L	Q	C	S	C	G	I	D	Y	Y	T	L	K	P	E	V	N
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	V	T	A	S	I	E	T	L	C	V	I	A	V	D	R	Y	F	A	I	T	S	P	F	K	Y	Q	S	L	L	T	K	N	K	A	R	V	I	I	L	M	V	W	I	V	S	G	L	T	S	S	I	V	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T					S		S	S	S	S	S		S																						T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	S	F	V	I	Y	M	F	V	V	H	F	T	I	P	M	I	I	I	F	F	C	Y	G	Q	L	V	F	T	V	K	E	A	A	A	Q	Q	Q	E	S	A	T	T	Q	K	A	E	K	E	V	T	R	M	V	I	I	M	V	I	A	F	L	I	C	W	V	P	Y	A	S	V	A	F	Y	I	F	T	H	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	V	P	L	V	I	M	V	F	V	Y	S	R	V	F	Q	E	A	K	R	Q	L	Q	K	I	D	K	S	E	G	R	F	H	V	K	F	C	L	K	E	H	K	A	L	K	T	L	G	I	I	M	G	T	F	T	L	C	W	L	P	F	F	I	V	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.																							T	S	S		T	T	T	T	T	S						S	S	T	T	S															T	T							.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.	.
Template SS confidence
										209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	N	F	G	P	I	F	M	T	I	P	A	F	F	A	K	S	A	A	I	Y	N	P	V	I	Y	I	M	M	N	K	Q	F	R	N	C	M	L	T	T	I	C	C	G	K	N	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	.	.	.	Y	I	L	L	N	W	I	G	Y	V	N	S	G	F	N	P	L	I	Y	C	.	R	S	P	D	F	R	I	A	F	Q	E	L	L	C	L	R	R	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.								G	G	G	G	G	T	T					T	T	.	S	S	S	T								T	T	T	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																					.
Template SS confidence
										308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions