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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank225Aligned Residues239
% Identity22%Templated1ob3a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390.........400....... ..410.........420.........430.........440....
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Query Sequence  SELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCE. . . EDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEF
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Template Sequence  EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH
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STTTTS


SSGGG


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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   445....450.........460.........470.........480.........490.........500.........510.........520....
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Query Sequence  MERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVLDDQYTSSSG
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Template Sequence  LDQDLKKLLDVCEG. GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR. . . . . . . . . AFG
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STSTT.


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   82.......90..... ....100.........110.........120.........130.........140........ .150.
 
   525....530.........540.........550.........560.........570.........580...
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Query Sequence  AKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHR. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN. GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT
Template Known Secondary structure 



TT

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TTTSTTGGGSTT

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   161........170.........180.........190...... ...200.........210.........220.........230.........
 
   584.....590.........600.........610.......
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Query Sequence  . . . . . . . LYQPKLASNYVYEVMLRCWQEKPEGRPSFEDLLR
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Template Sequence  VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE
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GGGT

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   240.........250.........260.........270.........280
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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