Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence99.71%DateFri May 25 09:36:11 BST 2012
Rank365Aligned Residues133
% Identity20%Templatec3qwyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260...... ...270.........280.........290.........300.........310 ....
Predicted Secondary structure 
















.






















....
Query SS confidence 


























.











































. . . .



Query Sequence  NNLDQYEWYCRNMNRSKAEQLLRSEDK. EGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPK. . . . KYYL
Query Conservation    
    

 
 


 


 

     . 
 



 
   
   


           



 
        ....   
Alig confidence 


























.





















...


















....



Template Conservation         

 
 


  

 

       





 

  
 
 


   ...     
 
  
                
Template Sequence  DPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSRPGEYSLTVREA. . . DEGNAVCHYLIERGEPKEDGTAAAGVK
Template Known Secondary structure 
GGGGGGGTT

STT

TT
SSTT


...SSSS




TTTT



Template Predicted Secondary structure 



























...













Template SS confidence 















































































   7..10.........20.........30.........40.........50...... ...60.........70.........80...
 
   315....320.........330.........340........ .350.........360.........370.........
Predicted Secondary structure 






















........















Query SS confidence 

































. . . . . . . .






























Query Sequence  AEKHAFGSIPEIIEYHKHNAAGLVTRLRYPVSVK. . . . . . . . GKNAPTTAGFSYEKWEINPSELTFMRELGSG
Query Conservation       
 

  

  
     

   
  
    ........               

          

 
Alig confidence 

































........
















....









Template Conservation       
 

  

  
    
                  

  
      

    

 ....
 
       
Template Sequence  IANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGER. . . . LEILSKTNQD
Template Known Secondary structure  TTSSS
SSS









SS
B

SSTTB

B
TT
....

SSS
Template Predicted Secondary structure 









































....



Template SS confidence 








































































   84.....90.........100.........110.........120.........130.........140.. .......150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions