Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank37Aligned Residues238
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380......... 390.........400.........410.........420.........430.........440.........450.
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Query Sequence  MRELGSGLFGVVRLGKW. RAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLL
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Template Sequence  FKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF
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   58.60.........70.........80.........90 .........100.........110.........120.........130.....
 
   452.......460.........470.........480.........490....... ..500.........510.........520........
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Query Sequence  NFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV. . . SEAGVVKVSDFGMARYVLDDQYTSSSGAKFP
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Template Sequence  EQIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGT
Template Known Secondary structure  S.


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   154.....160 .........170.........180.........190.........200.........210.........220....... ..230
 
   529530.........540.........550.........560.........570.........580........ .590.........600.....
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Query Sequence  VKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQPK. . . LASNYVYEVMLRCWQEK
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Template Sequence  AYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD
Template Known Secondary structure  TTT

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   231........240. ........250.........260. ........270.........280.........290.........300........
 
   606...610.......
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Query Sequence  PEGRPSFEDLLR
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Template Sequence  YNKRCTAEEALN
Template Known Secondary structure  TTTS

T
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   309310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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