Job Description P42680 Confidence 99.16% Date Fri May 25 09:36:11 BST 2012 Rank 450 Aligned Residues 115 % Identity 15% Template c3ml4D_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:protein dok-7; PDBTitle: crystal structure of a complex between dok7 ph-ptb and the musk2 juxtamembrane region Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.									.	.	.	.
Query SS confidence																																			.	.	.	.	.	.									.	.	.	.
Query Sequence		T	I	L	E	E	I	L	I	K	R	S	Q	Q	K	K	K	T	S	P	L	N	Y	K	E	R	L	F	V	L	T	K	S	M	.	.	.	.	.	.	L	T	Y	Y	E	G	R	A	.	.	.	.	E	K	K	Y	R	K	G	F	I	D	V	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C
Query Conservation																																			.	.	.	.	.	.									.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.									.	.	.	.																									.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template Sequence		A	L	V	E	G	Q	V	K	L	R	D	K	.	.	.	.	.	.	.	.	.	W	K	S	R	W	L	V	L	R	K	P	S	P	V	A	D	C	L	L	X	L	V	Y	K	D	K	C	E	R	S	K	G	L	R	E	R	S	S	L	T	L	E	D	I	C	G	L	E	P	A	L	P	Y	E	.	.	.	.	.
Template Known Secondary structure			S											.	.	.	.	.	.	.	.	.											S	S	S	S	S	S								S	S						T	T				S							S											T	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.										.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Q	N	K	Y	P	F	Q	V	V	H	D	A	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	L	W	V	K	K	L	K	E	E	I	K	N	N	N	N	I	M	I	K	Y	H	P	K	.	F	W	T	D	G	S	Y	Q	C	C
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		G	L	A	H	T	L	A	I	I	C	L	S	Q	A	V	X	L	G	F	D	S	H	E	A	X	C	A	W	D	T	R	I	R	Y	A	L	G	E	V	H	R	F	H	V	T	V	A	P	G	T	K	L	E	S	G	P	A	T	L	H
Template Known Secondary structure		T										S	S								S	S															T	S	S										S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions