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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank61Aligned Residues251
% Identity26%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390 .........400.........410.........420.........430.........440......
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFME
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60.........70.. .......80.........90..... ....100.........110.........120.........130....
 
   447..450.........460.........470.........480.........490....... ..500.........510.........520...
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Query Sequence  RGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV. . . SEAGVVKVSDFGMARYVLDDQYTSSS
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Template Sequence  GGELFDEIIHRM. KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER
Template Known Secondary structure  S
BS.S

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B


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   143......150.... .....160.........170.........180.........190.........200.........210.........220.
 
   524.....530.........540.........550.........560.........570.........580.. .......590.........600
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Query Sequence  GAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGH. . . RLYQPKLASNYVYEVMLR
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Template Sequence  . . LGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ
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   222.......230.... .....240.........250..... ....260.........270.........280.........290.......
 
   601........610........ .620........
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Query Sequence  CWQEKPEGRPSFEDLLRT. . IDELVECEET
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Template Sequence  MLQFDSQRRISAQQALEHPWIKEMCSKKES
Template Known Secondary structure  T
SSTTTS

T

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   298.300.........310.........320.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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