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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank154Aligned Residues238
% Identity25%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390 .........400....... ..410.........420.........430.........440....
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCE. . EDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEF
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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TTT

B


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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   445....450.........460.........470.........480.........490....... ..500.........510.........520.
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Query Sequence  MERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV. . . SEAGVVKVSDFGMARYVLDDQYTS
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Template Sequence  YTGGELFDEIIKRK. RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS. . . . . . . . . .
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   155....160........ .170.........180.........190.........200.........210.........220...
 
   522.......530.........540.........550.........560.........570.........580.. .......590........
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Query Sequence  SSGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGH. . . RLYQPKLASNYVYEVM
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Template Sequence  TCFQQNTTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
Template Known Secondary structure  TTB




GGG

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   224.....230.........240.........250.........260.. .......270.........280.........290.........300..
 
   599600.........610.......
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Query Sequence  LRCWQEKPEGRPSFEDLLR
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Template Sequence  RKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
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T
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   310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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