Job Description P42680 Confidence 99.72% Date Fri May 25 09:36:11 BST 2012 Rank 363 Aligned Residues 88 % Identity 25% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Q	Y	E	W	Y	C	R	N	M	N	R	S	K	A	E	Q	L	L	R	S	E	D	K	E	G	G	F	M	V	R	D	S	.	S	Q	P	G	L	Y	T	V	S	L	Y	T	K	F	G	G	E	G	S	S	G	F	R	H	Y	H	I	K	E	T	T	T	S	P	K	K	Y	Y	L	A	E	K	H	A	F	G	S
Query Conservation																																		.
Alig confidence								.																.										.													.	.	.	.	.
Template Conservation								.																.																							.	.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	.	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	.	.	.	.	.	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D
Template Known Secondary structure		T		T	T	B		.												T	T	S		.	T	T									S	T	T										.	.	.	.	.		T	T																				S	S	S				S	S
Template Predicted Secondary structure								.																.																							.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	E	I	I	E	Y	H	K	H	N	A	A	G	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions