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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank186Aligned Residues226
% Identity28%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380.........390 .........400. ........410.........420.........430.....
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Query Sequence  EKWEINPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQ
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Template Sequence  RQWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA
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G..GGTTTTT

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T


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S
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   126...130 .........140.........150.........160.........170.........180.........190.........200...
 
   436...440.........450.........460.........470.........480.........490.........500.........510.....
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Query Sequence  KPIYIVTEFMERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVL
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Template Sequence  TRVYLILEYAPLGTVYRELQKLS. KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . .
Template Known Secondary structure  S


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   204.....210.........220...... ...230.........240.........250.........260.........270......
 
   516...520.........530.........540.........550.........560.........570.........580.........590.....
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Query Sequence  DDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQPKLASNYVY
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Template Sequence  . . . . . . . . . . . . . . DYLPPEMI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGAR
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GGGT......

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   294.....300. ........310........ .320.........330........ .340.........350.
 
   596...600.........610.......
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Query Sequence  EVMLRCWQEKPEGRPSFEDLLR
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Template Sequence  DLISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   358.360.........370.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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