Job Description P42680 Confidence 99.57% Date Fri May 25 09:36:11 BST 2012 Rank 418 Aligned Residues 98 % Identity 12% Template c3a8nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: crystal structure of the tiam1 phccex domain Resolution 4.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		N	T	I	L	E	E	I	L	I	K	R	S	.	.	.	.	.	.	.	Q	Q	K	K	K	T	S	P	L	N	Y	K	E	R	L	F	V	L	T	K	S	M	L	T	Y	Y	E	G	R	A	E	K	K	Y	R	K	G	F	I	D	V	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C	Q	N
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																													.	.	.																							.	.	.	.	.	.
Template Conservation																																																	.	.	.																							.	.	.	.	.	.
Template Sequence		T	V	R	K	A	G	A	L	A	V	K	N	F	L	V	H	K	K	N	K	K	V	E	S	A	T	R	R	K	W	K	H	Y	W	V	S	L	K	G	C	T	L	F	F	Y	E	T	.	.	.	D	S	V	P	K	H	A	V	W	V	E	N	S	I	V	Q	A	V	P	E	H	P	.	.	.	.	.	.	K	K
Template Known Secondary structure				S															T	T	T																			T	T					B			.	.	.					S	S			B			S							T	T	S	S	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																	.	.	.																							.	.	.	.	.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.				480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.							.	.
		77	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	Y	P	F	Q	V	V	H	D	A	.	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	L	W	V	K	K	L	K	E	E	I
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		D	F	V	F	C	L	S	N	S	L	G	D	A	F	L	F	Q	T	T	S	Q	T	E	L	E	N	W	I	T	A	I	H	S	A	C
Template Known Secondary structure			S							T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions