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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank77Aligned Residues252
% Identity21%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390 .........400......... 410.........420.........430........
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Query Sequence  EINPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEED. . . . FIEEAKVMMKLTHPKLVQLYGVCTQQKPI
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL
Template Known Secondary structure  S

GGG
SS
TTT

GGG

S
TTTB


SS
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   439440.........450.........460.........470.........480.........490.........500.........510........
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Query Sequence  YIVTEFMERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVLDDQ
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Template Sequence  YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG
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S
BSS


TT



SGGG
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   519520.........530....... ..540.........550.........560.........570.........580.........590.
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Query Sequence  YTSSSGAKFPVKWCPPEVF. . . . . . . NYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQPKLAS
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Template Sequence  TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLSLPGVP
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SS

S
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T
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   225....230.........240.........250.........260.........270... ......280.........290.........300...
 
   592.......600......... 610.......
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Query Sequence  NYVYEVMLRCWQEKPEGR. . . PSFEDLLR
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Template Sequence  EEARDFIQRLLC. PPETRLGRGGAGDFRT
Template Known Secondary structure  TTSS.
GGG
TTTTTT
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   308.310......... 320.........330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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