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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank78Aligned Residues245
% Identity22%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390. ........400 .........410.........420.........430.........440.....
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Query Sequence  SELTFMRELGSGLFGVVRLGKWRA. QYKVAIKAI. REGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFM
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   446...450.........460.........470.........480.........490....... ..500.........510.........520..
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Query Sequence  ERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV. . . SEAGVVKVSDFGMARYVLDDQYTSS
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Template Sequence  TGGELFERVVHKR. VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT
Template Known Secondary structure 
SGGGGGTTTS.S

TT



SGGGSSSSTT




TT


TT

B

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   106...110........ .120.........130.........140.........150.........160.........170.........180....
 
   523......530.........540.........550.........560.........570.........580....... ..590.........600
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Query Sequence  SGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQP. . KLASNYVYEVMLR
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Template Sequence  KVG. . TPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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S..
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   185.. ..190.........200 .........210......... 220.........230.........240.........250.........260
 
   601........610.......
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Query Sequence  CWQEKPEGRPSFEDLLR
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   262.......270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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