Job Description P42680 Confidence 99.45% Date Fri May 25 09:36:11 BST 2012 Rank 439 Aligned Residues 89 % Identity 17% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	L	E	E	I	L	I	K	R	S	Q	Q	K	K	K	T	S	P	L	N	Y	K	E	R	L	F	V	L	T	K	S	M	L	T	Y	Y	E	G	R	A	E	K	K	Y	R	K	G	F	I	D	V	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C	Q	N	K	Y	P	F	Q	V	V	H
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.	.	.	.
Template Sequence		T	R	K	A	G	Y	L	N	A	R	T	.	.	.	.	.	.	.	.	.	.	W	D	R	Q	F	Y	F	T	Q	G	G	N	L	M	S	Q	A	R	G	D	.	.	V	A	G	G	L	A	M	D	I	D	N	C	S	V	M	A	V	D	C	E	D	.	.	.	.	.	.	.	R	R	Y	C	F	Q	I	T	S
Template Known Secondary structure		S											.	.	.	.	.	.	.	.	.	.										T	T							S	S		.	.	S	S								T	T									T	T	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																					.	.																						.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.
		85	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	A	.	.	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	L	W	V	K	K	L	K	E	E	I	K	N
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		F	D	G	K	K	S	S	I	L	Q	A	E	S	K	K	D	H	E	E	W	I	C	T	I	N	N	I	S	K	Q
Template Known Secondary structure		T	T	S		B							S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions