Job Description P42680 Confidence 100.00% Date Fri May 25 09:36:11 BST 2012 Rank 31 Aligned Residues 269 % Identity 36% Template c2psqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:fibroblast growth factor receptor 2; PDBTitle: crystal structure of unphosphorylated unactivated wild type2 fgf receptor 2 (fgfr2) kinase domain Resolution 2.40 Å

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		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.									390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																				.	.													.
Query SS confidence																																		.	.	.	.	.	.	.	.																				.	.													.
Query Sequence		F	S	Y	E	K	W	E	I	N	P	S	E	L	T	F	M	R	E	L	G	S	G	L	F	G	V	V	R	L	G	K	W	.	.	.	.	.	.	.	.	R	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	E	.	.	D	F	I	E	E	A	K	V	M	M	K	L	.	T	H	P	K	L	V
Query Conservation																																		.	.	.	.	.	.	.	.																				.	.													.
Alig confidence																																		.	.	.	.	.	.	.	.																				.	.													.
Template Conservation
Template Sequence		P	E	D	P	K	W	E	F	P	R	D	K	L	T	L	G	K	P	L	G	E	G	C	F	G	Q	V	V	M	A	E	A	V	G	I	D	K	D	K	P	K	E	A	V	T	V	A	V	K	M	L	K	D	D	A	T	E	K	D	L	S	D	L	V	S	E	M	E	M	M	K	M	I	G	K	H	K	N	I	I
Template Known Secondary structure					T	T	T	B			G	G	G								S			S	S	S									T		S	T	T		T	T												T	T																			S				T	T	B
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460					.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		Q	L	Y	G	V	C	T	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	Q	G	H	.	.	.	.	F	S	R	D	V	L	L	S	M	C	Q	D	V	C	E	G	M	E	Y	L	E	R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	S	E	A	G	V
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.
Template Conservation
Template Sequence		N	L	L	G	A	C	T	Q	D	G	P	L	Y	V	I	V	E	Y	A	S	K	G	N	L	R	E	Y	L	R	A	R	R	P	P	P	E	E	Q	M	T	F	K	D	L	V	S	C	T	Y	Q	L	A	R	G	M	E	Y	L	A	S	Q	K	C	I	H	R	D	L	A	A	R	N	V	L	V	T	E	N	N	V
Template Known Secondary structure									S	S	S	S									T	T		B								T																														T	T				S				G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	K	V	S	D	F	G	M	A	R	Y	V	L	D	D	Q	Y	T	S	S	S	G	.	A	K	F	P	V	K	W	C	P	P	E	V	F	N	Y	S	R	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	R	M	P	F	E	K	Y	T	N	Y	E	V	V	T	M	V	T	R	G
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		M	K	I	A	D	F	G	L	A	R	D	I	N	N	I	D	Y	Y	K	K	T	T	N	G	R	L	P	V	K	W	M	A	P	E	A	L	F	D	R	V	Y	T	H	Q	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	L	G	G	S	P	Y	P	G	I	P	V	E	E	L	F	K	L	L	K	E	G
Template Known Secondary structure								S	S				T	T				T	T		T	T	T	T	T	T	S		G	G	G								T																					T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	L	Y	Q	P	K	L	A	S	N	Y	V	Y	E	V	M	L	R	C	W	Q	E	K	P	E	G	R	P	S	F	E	D	L	L	R	T	I	D	E	L	V	E	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	M	D	K	P	A	N	C	T	N	E	L	Y	M	M	M	R	D	C	W	H	A	V	P	S	Q	R	P	T	F	K	Q	L	V	E	D	L	D	R	I	L	T	L	T
Template Known Secondary structure								T	T	S												T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions