Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence99.89%DateFri May 25 09:36:11 BST 2012
Rank295Aligned Residues108
% Identity53%Templatec2ekxA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic tyrosine-protein kinase bmx; PDBTitle: solution structure of the human bmx sh2 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   237..240.........250.........260.........270.........280.........290.........300.........310......
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  KKSNNLDQYEWYCRNMNRSKAEQLLRSEDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAE
Query Conservation       
    

 
 


 


 

      
 



 
   
   


           



 
           
  
Alig confidence 








































































..




Template Conservation       
    

 
 
 
 


 

      
 



 
       


             
          ..     
Template Sequence  SGSSGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENK. . LYLAE
Template Known Secondary structure 

SS
TTTSSSB

S

T

TT
SSTT




SS
SS




TT

..SST
Template Predicted Secondary structure 






































..

Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70..... ....80
 
   317..320.........330.........340......
Predicted Secondary structure 



















Query SS confidence 





























Query Sequence  KHAFGSIPEIIEYHKHNAAGLVTRLRYPVS
Query Conservation     
 

  

  
     

   
  
  
Alig confidence 





























Template Conservation     
 

  

  
      
   
  


Template Sequence  NYCFDSIPKLIHYHQHNSAGMITRLRHPVS
Template Known Secondary structure  T


S
S

SSS





Template Predicted Secondary structure 















Template SS confidence 





























   81........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions