Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence99.91%DateFri May 25 09:36:11 BST 2012
Rank287Aligned Residues120
% Identity51%Templatec2dm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase txk; PDBTitle: solution structure of the sh2 domain of human tyrosine-2 protein kinase txk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   235....240.........250.........260.........270.........280.........290.........300.........310....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  TGKKSNNLDQYEWYCRNMNRSKAEQLLRSEDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYL
Query Conservation         
    

 
 


 


 

      
 



 
   
   


           



 
           
Alig confidence 










































































..


Template Conservation         
    



 
 
 


 

     

 



 
       
             
            ..   
Template Sequence  SGNKITNLEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQ. . WYV
Template Known Secondary structure  SS

S


TTSSSB

S


STT
B
TT


SSSSS


TT

..S
Template Predicted Secondary structure 




































..
Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80 ...
 
   315....320.........330.........340.........350......
Predicted Secondary structure 






























Query SS confidence 









































Query Sequence  AEKHAFGSIPEIIEYHKHNAAGLVTRLRYPVSVKGKNAPTTA
Query Conservation       
 

  

  
     

   
  
            
Alig confidence 









































Template Conservation       
 

 


  
      
   
  

       
  
Template Sequence  AERHAFQSIPELIWYHQHNAAGLMTRLRYPVGLMGSSGPSSG
Template Known Secondary structure  SSS


SSTT


SSS



SB

SS
S





Template Predicted Secondary structure 
























Template SS confidence 









































   84.....90.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions