Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence99.63%DateFri May 25 09:36:11 BST 2012
Rank391Aligned Residues105
% Identity23%Templatec2dkpA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:pleckstrin homology domain-containing family a PDBTitle: solution structure of the ph domain of pleckstrin homology2 domain-containing protein family a member 5 from human
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ
Query Conservation        

 
 

          
 
 
 
 
    
 

         
  
 
  
  

                

Alig confidence 















....



















.


























....







Template Conservation         
 
 
    ....  
 



 


    
 
 .             
             ....        
Template Sequence  NAPVVRRGWLYKQDST. . . . GMKLWKKRWFVLSDLCLFYY. RDEKEEGILGSILLPSFQIALLTSEDH. . . . INRKYAFK
Template Known Secondary structure  TS




S....SS

TT.SSTT

S
GGGS

GGG
....
SS
S
Template Predicted Secondary structure 






....







.
















....



Template SS confidence 















































































   18.20.........30... ......40.........50... ......60.........70.........80 ........
 
   82... ....90.........100.........110.....
Predicted Secondary structure 

.








Query SS confidence 



.





























Query Sequence  VVHD. ANTLYIFAPSPQSRDLWVKKLKEEIKNNNN
Query Conservation 
   .   

  
    

  

  

        
Alig confidence 



.





























Template Conservation 
         
 
 
  
   

 

  
      
Template Sequence  AAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTS
Template Known Secondary structure 
SSS


SSS



Template Predicted Secondary structure 









Template SS confidence 


































   8990.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions