Job Description P42680 Confidence 99.61% Date Fri May 25 09:36:11 BST 2012 Rank 398 Aligned Residues 114 % Identity 18% Template c2dhkA_ PDB info PDB header:immune system Chain: A: PDB Molecule:tbc1 domain family member 2; PDBTitle: solution structure of the ph domain of tbc1 domain family2 member 2 protein from human Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		N	F	N	T	I	L	E	E	I	L	I	K	R	S	Q	Q	K	K	K	T	S	P	L	N	Y	K	E	R	L	F	V	L	T	K	S	M	L	T	Y	Y	E	.	G	R	A	E	K	K	Y	R	K	G	F	I	D	V	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C	Q	N	K	Y	P	F
Query Conservation																																											.
Alig confidence															.	.					.																						.																										.	.	.	.	.	.	.	.
Template Conservation															.	.					.																																																.	.	.	.	.	.	.	.
Template Sequence		S	S	G	K	K	L	C	G	Y	L	S	K	F	.	.	G	G	K	G	.	P	I	R	G	W	K	S	R	W	F	F	Y	D	E	R	K	C	Q	L	Y	Y	S	R	T	A	Q	D	A	N	P	L	D	S	I	D	L	S	S	A	V	F	D	C	K	A	D	A	.	.	.	.	.	.	.	.	E	E	G	I	F
Template Known Secondary structure			S												.	.	S		S	S	.	S	S												T	T	T	T						S	S	T	T			S		S					G	G	G							T	T	G	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure															.	.					.																																																.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	V	H	D	A	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	L	W	V	K	K	L	K	E	E	I	K	N	N	N	N	I	M	I	K	Y	H	P	K	F	W	T	D	G
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		E	I	K	T	P	S	R	V	I	T	L	K	A	A	T	K	Q	A	M	L	Y	W	L	Q	Q	L	Q	M	K	R	W	E	F	H	N	S	P	P	.	.	A	P	S	G	P	S	S	G
Template Known Secondary structure						S	S								S	S																					S		S	.	.	S	S	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions