Return to main results Retrieve Phyre Job Id

Job DescriptionP42680
Confidence99.76%DateFri May 25 09:36:11 BST 2012
Rank353Aligned Residues91
% Identity30%Templatec2ci8A_
PDB info PDB header:translationChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: sh2 domain of human nck1 adaptor protein - uncomplexed
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270..... ....280.........290.........300.........310.........320....
Predicted Secondary structure 
















.























Query SS confidence 





























.
















































Query Sequence  EWYCRNMNRSKAEQLLRSEDKEGGFMVRDS. SQPGLYTVSLYTKFGGEGSSGFRHYHIKETTTSPKKYYLAEKHAFGSIP
Query Conservation   

 
 


 


 

      
 



 
.   
   


           



 
           
     
 

 
Alig confidence 





























.











......













....












Template Conservation 




 
 
  

 

      
 



 
      
 


  ......     
  
     ....        
 

 
Template Sequence  PWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKA. . . . . . QGKNKHFKVQLKET. . . . VYCIGQRKFSTME
Template Known Secondary structure  TT


S



TT

SSSTTS......TT




....
TTSS
Template Predicted Secondary structure 




















......





....




Template SS confidence 















































































   281........290.........300.........310.........320... ......330....... ..340.........350
 
   325....330..... ....340......
Predicted Secondary structure 


.....










Query SS confidence 










. . . . .










Query Sequence  EIIEYHKHNAA. . . . . GLVTRLRYPVS
Query Conservation   

  
     .....

   
  
  
Alig confidence 










.....










Template Conservation   

  
    
        
 
  

 
Template Sequence  ELVEHYKKAPIFTSEQGEKLYLVKHLS
Template Known Secondary structure  S
S
TT








Template Predicted Secondary structure 









Template SS confidence 


























   351........360.........370.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions