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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank90Aligned Residues247
% Identity21%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390 .........400.........410.........420.........430.........440......
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGVCTQQKPIYIVTEFME
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   447..450.........460.........470.........480.........490.........500.........510.........520.... .
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Query Sequence  RGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVLDDQYTSSSG. A
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Template Sequence  GGELFDRIEPDI. GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM
Template Known Secondary structure  TGGGGSBTTT.B

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   8990.........100 .........110.........120.........130.........140.........150.........160.......
 
   526...530.........540.. .......550.........560.........570.........580 .........590.........600..
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Query Sequence  KFPVKWCPPEVFNYSRF. SSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTR. . GHRLYQPKLASNYVYEVMLRCW
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Template Sequence  CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL
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   168.170.........180.........190.........200... ......210.........220.........230.........240......
 
   603......610.......
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Query Sequence  QEKPEGRPSFEDLLR
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Template Sequence  VENPSARITIPDIKK
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   247..250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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