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Job DescriptionP42680
Confidence100.00%DateFri May 25 09:36:11 BST 2012
Rank92Aligned Residues245
% Identity22%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390 .........400. ........410......... 420.........430.........440.
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAKVMMK. LTHPKLVQLYGVCTQQKPIYIV
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV
Template Known Secondary structure  TT
SSSTTTTTT
TT
TTB


SS
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   378.380.........390.........400.........410.........420.........430.........440.........450.......
 
   442.......450.........460.........470.........480.........490.........500.........510.........520.
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Query Sequence  TEFMERGCLLNFLRQRQGHFSRDVLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSEAGVVKVSDFGMARYVLDDQYTS
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Template Sequence  MEYLNGGDLMYHIQSCH. KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT
Template Known Secondary structure 

TT
BS.S

TT
B




GGG
TTS



TT
B



TT

B
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   458.460.........470.... .....480.........490.........500.........510.........520.........530......
 
   522.......530.........540.........550.........560.........570.........580.........590.........600.
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Query Sequence  SSGAKFPVKWCPPEVFNYSRFSSKSDVWSFGVLMWEVFTEGRMPFEKYTNYEVVTMVTRGHRLYQPKLASNYVYEVMLRC
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Template Sequence  NFCGT. . PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKDLLVKL
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S
..GGG

TT

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   537..540. ........550.........560.........570... ......580.........590... ......600.........610..
 
   602.......610.. .....
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Query Sequence  WQEKPEGRPSF. EDLLR
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Template Sequence  FVREPEKRLGVRGDIRQ
Template Known Secondary structure  S
SSGGGSBTTBS
GGG
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   614.....620.........630
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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