Job Description P42680 Confidence 99.67% Date Fri May 25 09:36:11 BST 2012 Rank 373 Aligned Residues 104 % Identity 20% Template c1u5fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	T	I	L	E	E	I	L	I	K	R	S	Q	Q	K	K	K	T	S	P	L	N	Y	K	E	R	L	F	V	L	T	K	S	M	L	T	Y	Y	E	G	R	A	E	K	K	Y	R	K	G	F	I	D	V	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C	Q	N	K	Y	P	F	Q	V
Query Conservation
Alig confidence																								.																				.																								.	.	.
Template Conservation																								.																				.																								.	.	.
Template Sequence		P	F	V	I	K	A	G	Y	L	E	K	R	R	K	D	H	S	F	L	G	F	E	.	W	Q	K	R	W	C	A	L	S	K	T	V	F	Y	Y	Y	G	S	D	.	K	D	K	Q	Q	K	G	E	F	A	I	D	G	Y	D	V	R	M	N	N	T	L	R	.	.	.	K	D	G	K	K	D	C	C	F	E	I
Template Known Secondary structure		S	S														S	S		S	S		S	.										T	T						S	S	T	.	T		S	S		S						T	T							T	T	S		.	.	.	S	S	T	T	G	G	G
Template Predicted Secondary structure																								.																				.																								.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.
		83	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	H	D	.	A	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	L	W	V	K	K	L	K	E	E	I	K
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		C	A	P	D	K	R	I	Y	Q	F	T	A	A	S	P	K	D	A	E	E	W	V	Q	Q	L	K	F	I	L	Q
Template Known Secondary structure				T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions