Job Description Q9H6Q3 Confidence 99.82% Date Thu Apr 26 09:38:43 BST 2012 Rank 90 Aligned Residues 85 % Identity 19% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		H	G	W	L	Y	E	G	L	S	R	E	K	A	E	E	L	L	L	L	P	G	N	P	G	G	A	F	L	I	R	E	S	Q	T	R	R	G	S	Y	S	L	S	V	R	L	S	R	P	A	S	W	D	R	I	R	H	Y	R	I	H	C	.	.	L	D	N	G	W	L	Y	I	S	P	R	L	T	F	P	S	L
Query Conservation																																																															.	.
Alig confidence							.													.	.																													.	.	.	.										.	.
Template Conservation							.													.	.																													.	.	.	.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	.	.	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	.	.	.	.	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure			T	T	B		.												T	.	.	T	S		T	T									S	T	T											T	T	.	.	.	.																				S	S	S				S	S
Template Predicted Secondary structure							.													.	.																													.	.	.	.
Template SS confidence
		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	V	D	H	Y	S	E	L	A	D	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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