Job Description Q9H6Q3 Confidence 99.62% Date Thu Apr 26 09:38:43 BST 2012 Rank 98 Aligned Residues 76 % Identity 21% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	W	L	Y	E	G	L	S	R	E	K	A	E	E	L	L	L	L	P	G	N	P	G	G	A	F	L	I	R	E	S	Q	T	R	R	G	S	Y	S	L	S	V	R	L	S	R	P	A	S	W	D	R	I	R	H	Y	R	I	H	C	L	D	N	G	W	L	Y	I	S	P	R	L	T	F	P	S	L	Q	A
Query Conservation
Alig confidence							.														.	.	.											.																.	.	.	.									.	.
Template Conservation							.														.	.	.											.																.	.	.	.									.	.
Template Sequence		H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	.	.	.	.	V	F	V	H	M	K	I	E	.	.	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E
Template Known Secondary structure		S	T	T			.														.	.	.	S	S									.	S	S	T	T										T	T	.	.	.	.									.	.			S	S					T	T				S	S
Template Predicted Secondary structure							.														.	.	.											.																.	.	.	.									.	.
Template SS confidence
		792	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.				810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.					.	.	.	.	.	840	.	.			.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860
		172	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	H	Y	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	S	V	Y	V	R
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		861	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions