Job Description Q9H6Q3 Confidence 99.03% Date Thu Apr 26 09:38:43 BST 2012 Rank 248 Aligned Residues 57 % Identity 30% Template c2vknA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		T	A	V	A	L	G	S	F	P	A	G	G	P	A	.	.	E	L	S	L	R	L	G	E	P	L	T	I	V	S	E	D	G	D	W	W	T	V	L	S	E	V	S	G	R	E	Y	N	I	P	S	V	H	V	A	K	V	S	H	G
Query Conservation																.	.
Alig confidence																.	.																										.
Template Conservation																																											.
Template Sequence		K	A	K	A	L	Y	P	Y	D	A	D	D	D	D	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	D	I	E	G	R	W	W	K	A	R	R	A	.	N	G	E	T	G	I	I	P	S	N	Y	V	Q	L	I	D	G	P
Template Known Secondary structure						S	S		B				S	S	S	T	T	B			B		T	T								T	T	S	S							T	.	T	S							G	G	G
Template Predicted Secondary structure																																											.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions