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Job DescriptionQ9H6Q3
Confidence99.89%DateThu Apr 26 09:38:43 BST 2012
Rank70Aligned Residues95
% Identity28%Templatec2c9wA_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150......... 160.
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Query Sequence  AKVSHGWLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLSRPASWDRIRHYRIHCLDNGWLY. . . . . . IS
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Template Sequence  ELGQTGWYWGSMTVNEAKEKLK. . EAPEGTFLIRDSSHSDYLLTISVKTSA. . . . . GPTNLRIEYQDGKFRLDSIICVKS
Template Known Secondary structure  TS
B
TT

T..TS
TT


STT
STT.....TT
TTTTTGG
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   42.......50.........60... ......70.........80.........90 .........100.........110....
 
   162.......170.........180.........190.
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Query Sequence  PRLTFPSLQALVDHYSELADDICCLLKEPC
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Template Sequence  KLKQFDSVVHLIDYYVQMCKHL. . YLTKPL
Template Known Secondary structure  G


BS
T


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B
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   115....120.........130...... ...140..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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