Job Description Q9H6Q3 Confidence 99.43% Date Thu Apr 26 09:38:43 BST 2012 Rank 105 Aligned Residues 87 % Identity 13% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.												.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.												.	.	.	.
Query Sequence		L	P	S	R	R	K	S	L	P	S	P	S	L	S	S	S	V	Q	G	Q	G	P	V	T	M	E	A	E	R	S	K	A	T	A	V	A	L	G	S	F	P	A	G	G	P	A	E	L	S	L	R	L	G	E	P	L	T	I	V	.	.	.	.	.	.	S	E	D	G	D	W	W	T	V	L	S	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.												.	.	.	.
Alig confidence																																																													.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W
Template Known Secondary structure																									S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
						74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	V	S	G	R	E	Y	N	I	P	S	V	H	V	A	K	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure			T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions