Job Description A0AUZ9 Confidence 9.17% Date Sat Jun 16 10:19:00 BST 2012 Rank 43 Aligned Residues 78 % Identity 21% Template c3bvhE_ PDB info PDB header:blood clotting Chain: E: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide Resolution 2.60 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	S	Q	A	R	R	T	Q	K	H	L	Q	M	L	L	A	K	H	V	V	K	H	Y	G	Q	Q	M	K	L	S	M	K	H	Q	L	P	K	M	K	T	F	H	E	P	T	T	I	L	G	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		I	P	T	N	L	R	V	L	R	S	I	L	E	N	L	R	S	K	I	.	.	Q	K	L	E	S	D	V	S	A	Q	M	E	Y	C	R	T	P	C	T	V	S	C	N	I	P	V	V	S	G	K	E	C	E	E	I	I	R	K	G	G	E	T	S	E	M	Y	L	I	Q	P	D	S	S	V	K	P	Y	R	V
Template Known Secondary structure				S	T	T	T														.	.														T	T	S										S			B	S	S							T	T			S								S	S	T	T	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
									286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	P	K	C	T	E	I	K	P	E	V	N	T	L	T	A	E	N	K	L	W	D	D	A	K	N	G	F
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	C	D	M	N	T	E	N	G	G	W	T	V	I	Q	N	R	Q	D	G	S	V	D	F	G	R	K	W	D	P	Y	K	Q	G	F
Template Known Secondary structure						S	G	G	G	S									S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions