Phyre 2 alignment of A0AUZ9 with d1nh1a_

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Job Description | A0AUZ9
Confidence | 10.20% | Date | Sat Jun 16 10:19:00 BST 2012
Rank | 38 | Aligned Residues | 38
% Identity | 13% | Template | d1nh1a_
SCOP info | Antivirulence factor | Antivirulence factor | Antivirulence factor
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 816 | . | . | . | 820 | . | . | . | . | . | . |  |  |  | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | E | I | E | D | L | S | D | E | V | F | . | . | . | S | L | R | H | K | K | Y | E | E | R | E | Q | A | R | W | S | L | W | E | Q | S | K | W | H | R | R | N | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | H | L | N | D | L | Y | R | Q | A | I | S | S | D | L | S | Q | A | E | L | I | S | L | I | A | R | T | H | W | . | W | A | A | S | A | M | P | D | Q | R | G | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | B | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |  | . | . | . | 260 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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