Phyre 2 alignment of A0AUZ9 with c1mv4B_

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Job Description | A0AUZ9
Confidence | 15.88% | Date | Sat Jun 16 10:19:00 BST 2012
Rank | 22 | Aligned Residues | 22
% Identity | 36% | Template | c1mv4B_
PDB info | PDB header:de novo protein | Chain: B: PDB Molecule:tropomyosin 1 alpha chain; | PDBTitle: tm9a251-284: a peptide model of the c-terminus of a rat2 striated alpha tropomyosin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 818 | . | 820 | . | . | . | . | . | . | . | . | . |  |  |  | 830 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | E | D | L | S | D | E | V | F | S | L | R | . | . | . | H | K | K | Y | E | E | R | E | Q | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | D | L | E | D | E | L | Y | A | Q | K | L | K | Y | K | A | I | S | E | E | L | D | H | A
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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