Phyre 2 alignment of A0AUZ9 with c2fgtA_

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Job Description | A0AUZ9
Confidence | 16.26% | Date | Sat Jun 16 10:19:00 BST 2012
Rank | 20 | Aligned Residues | 18
% Identity | 56% | Template | c2fgtA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:two-component system yycf/yycg regulatory | PDBTitle: crystal structure of yych from bacillus subtilis
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 771 | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | I | D | N | I | V | I | P | M | S | L | V | A | P | A | K | L | E | K | L | Q | Y | K | E | I | L | T | P | S | W | R | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Sequence |  | K | I | D | Q | I | F | L | A | Y | Q | L | . | . | . | . | . | . | . | . | . | . | . | . | . | . | L | E | P | V | W | A | M
Template Known Secondary structure |  | G |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 405 | . | . | . | . | 410 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 420 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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