Phyre 2 alignment of A0AUZ9 with c2cxiA_

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Job Description | A0AUZ9
Confidence | 8.35% | Date | Sat Jun 16 10:19:00 BST 2012
Rank | 50 | Aligned Residues | 31
% Identity | 26% | Template | c2cxiA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:phenylalanyl-trna synthetase beta chain; | PDBTitle: crystal structure of an n-terminal fragment of the phenylalanyl-trna2 synthetase beta-subunit from pyrococcus horikoshii
Resolution | 1.94 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 787 | . | . | 790 | . | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | E | K | L | Q | Y | K | . | . | . | . | . | . | . | . | E | I | L | T | P | S | W | R | M | V | V | L | Q | P | L | D | E | Y | N | L | G | K | E | E | I | E | D | L | S | D | E | V | F | S | L
Query Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | E | K | X | X | Y | E | V | E | I | S | R | G | R | A | K | L | K | Y | P | A | F | R | D | . | D | I | X | H | . | . | . | . | . | . | . | . | . | . | A | R | D | I | L | E | D | V | L | I | A
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |  |  | . |  |  |  | S | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | 340 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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