Job Description A1A4F0 Confidence 5.64% Date Tue Apr 3 15:02:45 BST 2012 Rank 16 Aligned Residues 71 % Identity 18% Template c2w3cA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115 Resolution 2.22 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		L	G	F	L	D	C	W	I	G	G	D	L	T	N	F	K	G	C	Y	L	T	N	Q	L	P	I	Q	I	F	T	A	.	.	.	.	.	.	.	.	.	.	I	F	D	M	N	T	D	V	I	I	L	S	Q	F	M	Y	Y	.	R	L	K	N	Q	K	K	K	M	I	F	Q	P	Q	L	F	K	D	S	I	T
Query Conservation																																	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																.																	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																.
Template Sequence		L	M	L	L	C	T	W	L	S	N	C	P	I	A	.	V	T	H	F	L	H	N	S	A	N	V	P	F	L	T	G	Q	I	A	E	N	L	G	E	E	E	Q	L	V	Q	G	L	C	A	L	L	L	G	I	S	I	Y	F	N	D	N	S	L	E	S	Y	M	K	E	K	L	K	Q	L	I	E	K	R	I	G
Template Known Secondary structure										T	T					.						T	S	T	T											S			T	T	T	T																	T			S			S	S	S													T
Template Predicted Secondary structure																.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		114	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		574	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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