Job Description A0PJK1 Confidence 68.90% Date Tue Apr 3 14:59:03 BST 2012 Rank 10 Aligned Residues 126 % Identity 8% Template c3rlbA_ PDB info PDB header:thiamine-binding protein Chain: A: PDB Molecule:thit; PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		L	L	V	G	R	L	V	I	V	A	L	I	G	V	S	V	A	W	I	P	V	L	Q	D	S	N	S	G	Q	L	F	I	Y	M	Q	S	V	T	S	S	L	A	P	P	V	T	A	V	F	V	L	G	V	F	W	R	R	A	N	E	Q	G	A	F	W	G	L	I	A	G	L	V	V	.	G	A	T	R	L	V
Query Conservation																																																																											.
Alig confidence																																													.	.	.	.											.																.
Template Conservation																																													.	.	.	.											.
Template Sequence		L	R	R	G	L	T	A	G	L	V	G	G	L	I	W	G	I	L	S	M	I	T	G	H	A	Y	I	L	S	L	S	Q	A	F	L	E	Y	L	V	A	P	V	S	.	.	.	.	L	G	I	A	G	L	F	R	Q	K	.	T	A	P	L	K	L	A	P	V	L	L	G	T	F	V	A	V	L	L	K	Y	F
Template Known Secondary structure																							T	T		S			S	S									T						.	.	.	.	G	G	G	G	G	G	G				.	S	S	S
Template Predicted Secondary structure																																													.	.	.	.											.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	F	L	N	P	A	P	P	C	G	E	P	D	T	R	P	A	V	L	G	S	I	H	Y	L	H	F	A	V	A	L	F	A	L	S	G	A	V	V	V	A	G	S	L	L	T	P	P	P	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	F	I	A	G	I	I	F	W	S	Q	Y	A	W	K	G	W	G	A	V	A	Y	S	L	A	V	N	G	I	S	G	I	L	T	A	I	A	A	F	V	I	L	I	I	F	V	K	K	F	P	K
Template Known Secondary structure												G	G	G			T	T																																		G	G
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions