Job Description A0PJK1 Confidence 4.94% Date Tue Apr 3 14:59:03 BST 2012 Rank 19 Aligned Residues 124 % Identity 11% Template c3j01A_ PDB info PDB header:ribosome/ribosomal protein Chain: A: PDB Molecule:preprotein translocase secy subunit; PDBTitle: structure of the ribosome-secye complex in the membrane environment Resolution 7.10 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	N	E	Q	G	A	F	W	G	L	I	A	G	L	V	V	G	A	T	R	L	V	L	E	F	L	N	P	A	P	P	C	G	E	P	D	T	R	P	A	V	L	G	S	I	H	Y	L	H	F	A	V	A	L	F	A	L	S	G	A	V	V	V	A	G	S	L	L	T	P	P	P	Q	S	V	Q	I	E	N
Query Conservation
Alig confidence																																																																										.	.
Template Conservation																																																																										.	.
Template Sequence		K	V	N	M	A	G	V	I	P	A	I	F	A	S	S	I	I	L	F	P	A	T	I	A	S	W	F	G	G	G	T	G	W	N	W	L	T	T	I	S	L	Y	L	Q	P	G	Q	P	L	Y	V	L	L	Y	A	S	A	I	I	F	F	C	F	F	Y	T	A	L	V	F	N	P	.	.	R	E	T	A	D	N
Template Known Secondary structure						S	S		S		S	S																S	S	S				S	S			S	S	S	S					S	S	G	G	G	G	T																		S	S		T	.	.	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	W	W	T	L	A	Q	D	V	P	L	G	T	K	A	G	D	G	Q	T	P	Q	K	H	A	F	W	A	R	V	C	G	F	N	A	I	L	L	M	C	V	N	I	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	K	S	G	A	F	V	P	G	I	R	P	G	E	Q	T	A	K	Y	I	D	K	V	M	T	R	L	T	L	V	G	A	L	Y	I	T	F	I	C	L	I	P	E	F	M
Template Known Secondary structure		T	T	S	T	T		S	S	S			S	S	S	S	S	S		S																											T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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