Job Description A0PJK1 Confidence 2.58% Date Tue Apr 3 14:59:03 BST 2012 Rank 41 Aligned Residues 124 % Identity 9% Template c3dl8H_ PDB info PDB header:protein transport Chain: H: PDB Molecule:preprotein translocase subunit secy; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	N	E	Q	G	A	F	W	G	L	I	A	G	L	V	V	G	A	T	R	L	V	L	E	F	L	N	P	A	P	P	C	G	E	P	D	T	R	P	A	V	L	G	S	I	H	Y	L	H	F	A	V	A	L	F	A	L	S	G	A	V	V	V	A	G	S	L	L	T	P	P	P	Q	S	V	Q	I	E	N
Query Conservation
Alig confidence																																											.	.	.	.	.																									.
Template Conservation																																											.	.	.	.	.																									.
Template Sequence		K	I	N	P	A	G	V	I	P	I	I	F	A	Q	A	L	L	L	I	P	S	T	L	L	N	F	V	Q	N	P	F	I	K	V	I	A	D	M	F	Q	P	.	.	.	.	.	G	A	I	F	Y	N	F	L	Y	V	T	F	I	V	F	F	T	Y	F	Y	T	A	V	L	.	I	N	P	V	E	L	A	E	N
Template Known Secondary structure								S	S																		S		S	S					T	T	T	T	T	T	T	T	.	.	.	.	.	T																					T		T	.	T								T
Template Predicted Secondary structure																																											.	.	.	.	.																									.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	W	W	T	L	A	Q	D	V	P	L	G	T	K	A	G	D	G	Q	T	P	Q	K	H	A	F	W	A	R	V	C	G	F	N	A	I	L	L	M	C	V	N	I	F	F	Y	A	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	K	A	G	A	F	I	P	G	V	R	P	G	Q	D	T	V	K	Y	L	E	R	I	I	N	R	L	I	F	F	G	A	L	F	L	S	V	I	A	L	I	P	I	L	I	S	V	W	F
Template Known Secondary structure						B	S	S	S	B																																						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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