Job Description A0PJK1 Confidence 1.93% Date Tue Apr 3 14:59:03 BST 2012 Rank 58 Aligned Residues 121 % Identity 7% Template c2zqpY_ PDB info PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: crystal structure of secye translocon from thermus2 thermophilus Resolution 6.00 Å

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		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	N	E	Q	G	A	F	W	G	L	I	A	G	L	V	V	G	A	T	R	L	V	L	E	F	L	N	P	A	P	P	C	G	E	P	D	T	R	P	A	V	L	G	S	I	H	Y	L	H	F	A	V	A	L	F	A	L	S	G	A	V	V	V	A	G	S	L	L	T	P	P	P	Q	S	V	Q	I	E	N
Query Conservation
Alig confidence																																									.	.	.	.																												.
Template Conservation																																									.	.	.	.																												.
Template Sequence		K	L	N	A	A	G	V	I	P	I	I	F	A	A	A	I	L	Q	I	P	I	F	L	A	A	P	F	Q	D	N	P	V	L	Q	G	I	A	N	F	.	.	.	.	F	N	P	T	R	P	S	G	L	F	I	E	V	L	L	V	I	L	F	T	Y	V	Y	T	A	V	Q	.	F	D	P	K	R	I	A	E	S
Template Known Secondary structure			S	S	S		S	S										T	T					T	T	T	T		S	S	S	T	T								.	.	.	.	S		T	T	S																			T	T	T	S	.	S
Template Predicted Secondary structure																																									.	.	.	.																												.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	W	W	T	L	A	Q	D	V	P	L	G	T	K	A	G	D	G	Q	T	P	Q	K	H	A	F	W	A	R	V	C	G	F	N	A	I	L	L	M	C	V	N	I	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	Y	G	G	F	I	P	G	I	R	P	G	E	P	T	V	K	F	L	E	H	I	V	S	R	L	T	L	W	G	A	L	F	L	G	L	V	T	L	L	P	Q	I	I
Template Known Secondary structure		T	T	S	S					T	T			S	S	S	T	T	T	T	T	T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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