Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJK1
Confidence1.59%DateTue Apr 3 14:59:03 BST 2012
Rank83Aligned Residues34
% Identity9%Templatec2kluA_
PDB info PDB header:immune system, membrane proteinChain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40....
Predicted Secondary structure 









Query SS confidence 

































Query Sequence  TPGTQLSVADIIVITVYFALNVAVGIWSSCRASR
Query Conservation       
  

  

  
    
 

    

   
Alig confidence 

































Template Conservation   
   



 

  
 


  
  

   
 


Template Sequence  VPRGSMALIVLGGVAGLLLFIGLGIFFSVRSRHR
Template Known Secondary structure  S


SSSS

Template Predicted Secondary structure 





Template SS confidence 

































   367..370.........380.........390.........400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions