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Job DescriptionQ2TBF2
Confidence99.88%DateThu Apr 26 09:35:20 BST 2012
Rank24Aligned Residues215
% Identity15%Templatec1nstA_
PDB info PDB header:sulfotransferaseChain: A: PDB Molecule:heparan sulfate n-deacetylase/n-sulfotransferase; PDBTitle: the sulfotransferase domain of human haparin sulfate n-2 deacetylase/n-sulfotransferase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   338.340.........350.........360... ......370.........380.........390.........400........
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Query Sequence  GKSKQLIALASFPGAGNTWARHLIEL. . . . . . . . . ATGFYTGSYYFDGSLYNKGFKGERDHWRSGRTICIKTHESGQKEI
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Template Sequence  CDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFNGHNYHKGIDWYMEFFPISDFYFEKSANYFDSEV
Template Known Secondary structure 
TTS


TTSSTSTT


BTTTBT



SSSGGGGG
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TTTTT
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   601........610.........620.........630.........640.........650.........660.........670.........680
 
   409 410.........420.........430.........440...... ...450.........460 .........
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Query Sequence  E. . . . . . . . AFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWK. . . . . . . . . GKEWPEFVRNYAPW. . WATHTLDWL
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Template Sequence  APRRAAALLPKAKVLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIERWL
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   686...690.........700.........710.........720.........730.........740.........750.........760.....
 
   470. ........480.........490.........500.........510.........520...... ...530......
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Query Sequence  KF. . GKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKL. . . . . . . . . . . EYDPYTADMQ
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Template Sequence  SAYHANQILVLDGKLLRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEGGKTKCLGKSKGRKYPEMDLDSR
Template Known Secondary structure  TTS
GGG
T
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SGGGTTTT
STT



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   766...770.........780.........790.........800.........810.........820.........830.........840.....
 
   537..540.........550..
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Query Sequence  KTISAYIKMVDAALKG
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Template Sequence  AFLKDYYRDHNIELSK
Template Known Secondary structure 
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   846...850.........860.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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