 |
| Job Description | Q2TBF2 | | Confidence | 36.98% | Date | Thu Apr 26 09:35:20 BST 2012 |
| Rank | 38 | Aligned Residues | 28 |
| % Identity | 25% | Template | c1s2xA_ |
| PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:cag-z; |
PDBTitle: crystal structure of cag-z from helicobacter pylori
|
| Resolution | 1.90 Å |
|
|   |   |
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | E | Y | D | P | Y | T | A | D | M | Q | K | T | I | S | A | Y | I | K | M | V | D | A | A | L | K | G | R | N | L | T | G | V | P | D | D | Y | Y | P |
| Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Sequence |   |
D | N | F | N | N | F | T | C | D | E | V | A | R | I | S | D | L | V | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | L | P | R | E | Y | L | P |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | . | T | S |
| G | G | G |
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|