Job Description P52735 Confidence 99.93% Date Wed Jun 6 09:50:28 BST 2012 Rank 41 Aligned Residues 157 % Identity 21% Template c3qwyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2 Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.			.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.				.	.	.	.	720	.	.	.	.	.	.	.								.	.	730	.
Predicted Secondary structure																														.	.																									.	.	.													.	.	.	.	.	.	.
Query SS confidence																														.	.																									.	.	.													.	.	.	.	.	.	.
Query Sequence		R	E	I	D	Y	T	A	Y	P	W	F	A	G	N	M	E	R	Q	Q	T	D	N	L	L	K	S	H	A	.	.	S	G	T	Y	L	I	R	E	R	P	A	E	A	E	R	F	A	I	S	I	K	F	N	D	.	.	.	E	V	K	H	I	K	V	V	E	K	D	N	.	.	.	.	.	.	.	W	I	H	I
Query Conservation																														.	.																									.	.	.													.	.	.	.	.	.	.
Alig confidence																														.	.												.													.	.	.													.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		G	F	D	P	F	E	W	R	S	F	Y	F	P	G	M	S	R	E	E	A	H	K	L	L	G	E	P	Q	V	S	I	G	T	F	L	M	R	D	S	S	R	.	P	G	E	Y	S	L	T	V	R	E	A	D	E	G	N	A	V	C	H	Y	L	I	E	R	G	E	P	K	E	D	G	T	A	A	A	G	V	K
Template Known Secondary structure					G	G	G	G	G	G	G			T	T												S	T	T			T	T								S	S	.	T	T										S	S	S	S														T	T	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	K	K	F	D	S	L	L	E	L	V	E	Y	Y	Q	C	H	S	L	K	E	S	F	K	Q	L	D	T	T	L	K	Y	P	Y	K	S	R	E	R	S	A	S	R	A	S	S	R	S	P	A	S	C	A	S	Y	N	F	S	F	L	S	P	Q	G	L	S	F	A	S	Q	G	P	S	A	P	F	W	S
Query Conservation
Alig confidence																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	N	Q	S	F	P	D	I	P	A	L	L	N	H	F	K	M	R	V	L	T	E	A	.	.	S	L	L	A	A	Y	K	K	P	I	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T				S	S											S		S	S	S		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.
		812	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860		.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		V	F	T	P	R	V	I	G	T	A	V	A	R	Y	N	F	A	A	R	D	M	R	E	L	S	L	R	E	G	D	V	V	R	I	Y	S	R	I	G	G	D	Q	G	W	W	K	G	E	T	.	N	G	R	I	G	W	F	P	S	T	Y	V	E	E	E
Query Conservation																																																			.
Alig confidence		.	.	.	.	.	.	.	.																														.	.											.
Template Conservation		.	.	.	.	.	.	.	.																														.	.
Template Sequence		.	.	.	.	.	.	.	.	V	V	V	G	T	F	K	F	T	G	E	R	E	T	D	L	P	F	E	Q	G	E	R	L	E	I	L	S	K	.	.	T	N	Q	D	W	W	E	A	R	N	A	L	G	T	T	G	L	V	P	A	N	Y	V	Q	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.					S	S		B			S	S	T	T	B			B		T	T									.	.		S	S	S							T	T	S							G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																														.	.
Template SS confidence
										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions