Job Description P52735 Confidence 99.30% Date Wed Jun 6 09:50:28 BST 2012 Rank 260 Aligned Residues 105 % Identity 12% Template c3qwmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:iq motif and sec7 domain-containing protein 1; PDBTitle: crystal structure of gep100, the plextrin homology domain of iq motif2 and sec7 domain-containing protein 1 isoform a Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		403	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																							.	.
Query SS confidence																.	.	.	.																							.	.
Query Sequence		F	G	R	P	K	I	D	G	E	L	K	V	R	S	.	.	.	.	I	V	N	H	T	K	Q	D	R	Y	L	F	L	F	D	K	V	V	I	V	C	K	.	.	R	K	G	Y	S	Y	E	L	K	E	I	I	E	L	L	F	H	K	M	T	D	D	P	M	N	N	K	D	V	K	K	S	H	G	K	M	W	S
Query Conservation																.	.	.	.																							.	.
Alig confidence																.	.	.	.																							.	.																											.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		H	R	R	L	V	C	Y	C	R	L	F	E	V	P	D	P	N	K	P	Q	K	L	G	L	H	Q	R	E	I	F	L	F	N	D	L	L	V	V	T	K	I	F	Q	N	S	V	T	Y	S	F	R	Q	S	F	S	L	Y	G	M	Q	V	L	L	F	E	N	Q	Y	.	.	.	.	.	.	Y	P	N	G	I	R
Template Known Secondary structure															S		T	T	S				T	T	T	T								S	S																							T	T									S	S	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.							.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	Y	L	I	H	L	Q	G	K	Q	G	F	Q	F	F	C	K	T	E	D	M	K	R	K	W	M	E	Q	F	E	M	A	M	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	S	S	V	P	G	A	D	I	K	V	L	I	N	F	N	A	P	N	P	Q	D	R	K	K	F	T	D	D	L	R	E	S	I	A	E
Template Known Secondary structure							T	T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions