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Job DescriptionP52735
Confidence99.43%DateWed Jun 6 09:50:28 BST 2012
Rank253Aligned Residues153
% Identity28%Templatec3nhnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: crystal structure of the src-family kinase hck sh3-sh2-linker2 regulatory region
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   588.590.........600.........610.........620.........630.........640.........650.........660.......
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Query Sequence  GPKMVAMQNYHGNPAPPGKPVLTFQTGDVLELLRGDPESPWWEGRLVQTRKSGYFPSSSVKPCPVDGRPPISRPPSREID
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Template Sequence  DIIVVALYDY. . . . EAIHHEDLSFQKGDQMVVLEESGE. . WWKARSLATRKEGYIPSNYVARVDSLETEE. . . . . . . . . .
Template Known Secondary structure 

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TT
TT..TTT

GGG

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   83......90.. .......100.........110...... ...120.........130.........140......
 
   668.670.........680....... ..690.........700.........710.........720.... .....730.........
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Query Sequence  YTAYPWFAGNMERQQTDNLL. . KSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVE. . . . . . KDNWIHITEAKKFDS
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Template Sequence  . . . . . WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFST
Template Known Secondary structure  .....TTT

STT

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   148.150.........160.........170.........180.........190.........200.........210.........220..
 
   740.........750.........760......
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Query Sequence  LLELVEYYQCHSLKESFKQLDTTLKYP
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Template Sequence  LQELVDHYKKGN. . . . . DGLCQKLSVP
Template Known Secondary structure  TTT

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   223......230.... .....240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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