Return to main results Retrieve Phyre Job Id

Job DescriptionP52735
Confidence99.39%DateWed Jun 6 09:50:28 BST 2012
Rank257Aligned Residues57
% Identity19%Templatec3lh5A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: crystal structure of the sh3-guanylate kinase core domain of zo-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   819820.........830.........840......... 850......... 860.........870.....
Predicted Secondary structure 



















.





......





Query SS confidence 






























.









. . . . . .















Query Sequence  GTAVARYNFAARDMRELSLREGDVVRIYSRI. GGDQGWWKGE. . . . . . TNGRIGWFPSTYVEEE
Query Conservation      




 
    



  



 

   .  
 


 

......  

 
 







 
Alig confidence 






























.









......















Template Conservation   



  

       
 
  



 
  
       

 
  
         
 


    
 
Template Sequence  FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ
Template Known Secondary structure 
S
B

SSTTB

B
TT

TTTTTTS
GGG

Template Predicted Secondary structure 
































Template SS confidence 































































   519520.........530.........540.........550.........560.........570.........580..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions