Job Description P52735 Confidence 99.97% Date Wed Jun 6 09:50:28 BST 2012 Rank 35 Aligned Residues 212 % Identity 25% Template c2lqnA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:crk-like protein; PDBTitle: solution structure of crkl Resolution UNK

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		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	R	E	I	D	Y	T	A	Y	P	W	F	A	G	N	M	E	R	Q	Q	T	D	N	L	L	K	S	H	A	S	G	T	Y	L	I	R	E	R	P	A	E	A	E	R	F	A	I	S	I	K	F	N	D	E	V	K	H	I	K	V	V	E	K	D	N	W	I	H	I	T	E	A	K	K	F	D	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	A	R	F	D	S	S	D	R	S	A	W	Y	M	G	P	V	S	R	Q	E	A	Q	T	R	L	Q	G	Q	R	H	G	M	F	L	V	R	D	S	S	T	C	P	G	D	Y	V	L	S	V	S	E	N	S	R	V	S	H	Y	I	I	N	S	L	P	N	R	R	F	K	I	G	D	Q	E	F	D	H	L
Template Known Secondary structure			S			S		S	S									S										S	S	S	T	T	S	S								S	S	S	T	T								S	T	T											T	T	T					T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	L	V	E	Y	Y	Q	C	H	S	L	K	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	L	L	E	F	Y	K	I	H	Y	L	D	T	T	T	L	I	E	P	A	P	R	Y	P	S	P	P	M	G	S	V	S	A	P	N	L	P	T	A	E	D	N	L	E	Y	V	R	T	L	Y	D	F	P	G	N	D	A	E	D	L	P	F	K	K	G	E	I	L	V	I	I	E	K	P	E	E	Q	W	W
Template Known Secondary structure								T	T	T	T		S	S	S	S								S	S					S	S					S	S		S	S	S	S	S	S	S	S					S	S		B				S	S	S	B			B		S	S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
				756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.														820
Predicted Secondary structure		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	F	K	Q	L	D	T	T	L	K	Y	P	Y	K	S	R	E	R	S	A	S	R	A	S	S	R	S	P	A	S	C	A	S	Y	N	F	S	F	L	S	P	Q	G	L	S	F	A	S	Q	G	P	S	A	P	F	W	S	V	F	T	P	R	V	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	R	N	K	D	G	R	V	G	M	I	P	V	P	Y	V	E	K	L	V	R	S	S	P	H	G	K	H	G	N	R	N	S	N	S	Y	G	I	P	E	P	A	H	A	Y	A	Q	P	Q	T	T	T	P	L	P	A	V	S	G	S	P	G	A	A	I	T	P	L	P	S	T	Q	N	G	P	V	F	A	K
Template Known Secondary structure						S	S								G	G	G				S	S						S	S	T	T					S	S						G	G	G	T	T															S						S				S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	R	Y	N	F	A	A	R	D	M	R	E	L	S	L	R	E	G	D	V	V	R	I	Y	S	R	I	G	G	D	Q	G	W	W	K	G	E	T	N	G	R	I	G	W	F	P	S	T	Y	V	E	E
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		A	I	Q	K	R	V	P	C	A	Y	D	K	T	A	L	A	L	E	V	G	D	I	V	K	V	T	R	M	.	.	N	I	N	G	Q	W	E	G	E	V	N	G	R	K	G	L	F	P	F	T	H	V	K	I
Template Known Secondary structure				S		B				T	T		S	S	B			B		T	T									.	.		T	T	S							S	S								T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions