Return to main results Retrieve Phyre Job Id

Job DescriptionP52735
Confidence98.57%DateWed Jun 6 09:50:28 BST 2012
Rank286Aligned Residues124
% Identity26%Templatec2eo6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:b-cell linker protein; PDBTitle: solution structure of the sh2 domain from mouse b-cell2 linker protein blnk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   653......660.........670.........680....... ..690.........700...... ...710.........720.........
Predicted Secondary structure 


































.















..















Query SS confidence 


































.


















. .






















Query Sequence  DGRPPISRPPSREIDYTAYPWFAGNMERQQTDNLL. KSHASGTYLIRERPAEAER. . FAISIKFNDEVKHIKVVEKDNWI
Query Conservation                             
  
   
.     
   

 
      ..   
      
    
       
Alig confidence 


































.


















..






















Template Conservation    

           
    

 
 
 
 


 

     

 



 
    
   
 


     
 
  
       
Template Sequence  SSGPFNSTFADQEAELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATK
Template Known Secondary structure 
SSTT

TTTT
SSS



TT
B

STT
SS
STT
TTTT
Template Predicted Secondary structure 












































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   730 .........740.........750.. .......760.........770......
Predicted Secondary structure 
......





















....























Query SS confidence 
. . . . . .





















. . . .























Query Sequence  H. . . . . . ITEAKKFDSLLELVEYYQCHSL. . . . KESFKQLDTTLKYPYKSRERSASR
Query Conservation   ......        
   
       
 ....      
      
          
Alig confidence 
......





















....























Template Conservation     

        
 

  

  
    
 
            
  

     
   
Template Sequence  QYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSSGPSSG
Template Known Secondary structure 
SSS

TT


BSSS





SSS









B





S


Template Predicted Secondary structure 



































Template SS confidence 
























































   85....90.........100.........110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions