Return to main results Retrieve Phyre Job Id

Job DescriptionP52735
Confidence99.07%DateWed Jun 6 09:50:28 BST 2012
Rank268Aligned Residues134
% Identity40%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   647..650.........660.........670.........680.........690.........700.........710.........720......
Predicted Secondary structure 





































































Query SS confidence 















































































Query Sequence  VKPCPVDGRPPISRPPSREIDYTAYPWFAGNMERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKD
Query Conservation 
 
                              
  
   
     
   

 
         
      
    
    
Alig confidence 















































































Template Conservation                   
   
    



 
 
  

 

     
 



 
        


       
  
    
Template Sequence  SSGSSGKAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAE
Template Known Secondary structure 













S


SS
GGGSSSB

S

TTTS
TT

SSTT


TT
T
Template Predicted Secondary structure 





















































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   727..730.........740.........750.........760.........770.........780
Predicted Secondary structure 





















































Query SS confidence 





















































Query Sequence  NWIHITEAKKFDSLLELVEYYQCHSLKESFKQLDTTLKYPYKSRERSASRASSR
Query Conservation              
   
       
       
      
              
Alig confidence 





















































Template Conservation            
 

 


  
    
      
   
  
       
     
Template Sequence  GLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKRTISRSGP
Template Known Secondary structure  TSSTT

BSSTTS
GGGT
TT





SS





SS



Template Predicted Secondary structure 




































Template SS confidence 





















































   82.......90.........100.........110.........120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions