Job Description P52735 Confidence 99.80% Date Wed Jun 6 09:50:28 BST 2012 Rank 54 Aligned Residues 146 % Identity 21% Template c1p5sA_ PDB info PDB header:cytokine Chain: A: PDB Molecule:ras gtpase-activating-like protein rng2; PDBTitle: structure and function of the calponin-homology domain of2 an iqgap protein from schizosaccharomyces pombe Resolution 2.22 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	C	G	R	W	L	I	D	C	K	V	L	P	P	N	H	R	V	V	W	P	S	A	V	V	F	D	L	A	Q	A	L	R	D	G	V	L	L	C	Q	L	L	H	N	L	S	P	G	S	I	D	L	K	D	I	N	F	R	P	Q	M	S	Q	F	L	C	L	K	N	I	R	T	F	L	K	V	C	H	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																																			.	.									.
Template Conservation												.	.	.	.	.	.	.	.																																			.	.									.
Template Sequence		D	E	A	K	K	W	I	E	E	C	.	.	.	.	.	.	.	.	L	G	T	D	L	G	P	T	S	T	F	E	Q	S	L	R	N	G	V	V	L	A	L	L	V	Q	K	F	Q	P	D	K	L	I	.	.	K	I	F	Y	S	N	E	L	.	Q	F	R	H	S	D	N	I	N	K	F	L	D	F	I	H	G
Template Known Secondary structure												.	.	.	.	.	.	.	.		T	S					G	G	G						T	T	S												T	T	S			.	.						S	S	S	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																			.	.									.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	G	L	R	N	S	E	L	F	D	P	F	D	L	F	D	V	R	D	F	G	K	V	I	S	A	V	S	R	L	S	L	H	S	I	A	Q	N	K	G	I	R	P	F	P	S	E	E	T	T	E	N	D	D	D	V	Y	R	S	L	E	E	L	A	D	E	H	D	L	G	E	D	I	Y	D	C	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	G	L	P	E	I	F	H	F	E	L	T	D	I	Y	E	G	K	N	L	P	K	V	I	Y	C	I	H	A	L	S	Y	F	L	S	M	Q	D	L	A	P	P	L	I	K	S	D	E	N	L	S	F	T	D	E	D	V	S	I	I	V	R	R	L	R	Q	S	N	V	I	L	P	N	F	K	A	L
Template Known Secondary structure		.	T	T			G	G	G									S		S																			T	T	S	S								T	T																									S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions