Job Description P52735 Confidence 99.87% Date Wed Jun 6 09:50:28 BST 2012 Rank 46 Aligned Residues 152 % Identity 18% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	K	D	N	W	I	H	I	T	E	A	K	K	F	D	S	L	L	E	L	V	E	Y	Y	Q	C	H	S	L	K	E	S	F	K	Q	L	D	T	T	L	K	Y	P	Y	K	S	R	E	R	S	A	S	R	A	S	S	R	S	P	A	S	C	A	S	Y	N	F	S	F	L	S	P	Q	G	L	S	F	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V
Template Known Secondary structure																																										S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.				850	.	.	.	.	.	.	.	.											.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	P	S	A	P	F	W	S	V	F	T	P	R	V	I	G	T	A	V	A	R	Y	N	F	A	A	R	D	M	R	E	L	S	L	R	E	G	D	V	V	R	I	Y	S	R	I	.	.	.	G	G	D	Q	G	W	W	K	G	.	.	.	.	.	.	.	.	.	.	E	T	N	G	R	I	G	W	F	P	S
Query Conservation																																																	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E
Template Known Secondary structure										S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		870	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	V	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	T	E	R
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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