Job Description P52735 Confidence 100.00% Date Wed Jun 6 09:50:28 BST 2012 Rank 19 Aligned Residues 311 % Identity 20% Template c1dbhA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:protein (human sos 1); PDBTitle: dbl and pleckstrin homology domains from hsos1 Resolution 2.30 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.
Predicted Secondary structure																																			.	.	.																																					.	.	.	.	.
Query SS confidence																																			.	.	.																																					.	.	.	.	.
Query Sequence		K	R	N	C	C	L	L	E	I	Q	E	T	E	A	K	Y	Y	R	T	L	E	D	I	E	K	N	Y	M	S	P	L	R	L	.	.	.	V	L	S	P	A	D	M	A	A	V	F	I	N	L	E	D	L	I	K	V	H	H	S	F	L	R	A	I	D	V	S	V	M	V	G	G	.	.	.	.	.	S	T	L
Query Conservation																																			.	.	.																																					.	.	.	.	.
Alig confidence																																			.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		T	Y	Y	D	L	V	K	A	F	X	A	E	I	R	Q	Y	I	R	E	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L	L	G	H	I	E	D	T	V	E	X	T	D	E	G	S	P	H	P	L	V
Template Known Secondary structure																											T	T	T							T	T	T											T	T																					T			T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure											.	.																									.	.
Query SS confidence											.	.																									.	.
Query Sequence		A	K	V	F	L	D	F	K	E	.	.	R	L	L	I	Y	G	E	Y	C	S	H	M	E	H	A	Q	N	T	L	N	Q	L	L	A	.	.	S	R	E	D	F	R	Q	K	V	E	E	C	T	L	K	V	Q	D	G	K	F	K	L	Q	D	L	L	V	V	P	M	Q	R	V	L	K	Y	H	L	L	L	K	E
Query Conservation											.	.																									.	.
Alig confidence											.	.																									.	.
Template Conservation
Template Sequence		G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G	A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V	L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y	F	E	L	L	K	Q
Template Known Secondary structure											T	T	T	T											T	S	T	T											S	T	T										T	T								T					T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.										.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.										.									.
Query SS confidence																																													.	.	.	.	.	.	.	.	.										.									.
Query Sequence		L	L	S	H	S	A	E	R	P	E	R	Q	Q	L	K	E	A	L	E	A	M	Q	D	L	A	M	Y	I	N	E	V	K	R	D	K	E	T	L	R	K	I	S	E	.	.	.	.	.	.	.	.	.	F	Q	S	S	I	E	N	L	Q	.	V	K	L	E	E	F	G	R	.	P	K	I	D	G	E	L	K	V
Query Conservation																																													.	.	.	.	.	.	.	.	.										.									.
Alig confidence																																													.	.	.	.	.	.	.	.	.										.									.
Template Conservation
Template Sequence		L	E	E	K	S	E	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A	L	L	N	V	Q	S	G	X	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	A	I	K	K	X	N	E	I	Q	K	N	I	D	G	W	E	G	K	D	I	G	Q	C	C	N	E	F	I	X	E	G	T	L	T	R
Template Known Secondary structure							S															T													S										T			T								T	T			S			S	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	V	N	H	T	K	Q	D	R	Y	L	F	L	F	D	K	V	V	I	V	C	K	R	K	G	Y	S	Y	E	L	K	E	I	I	E	L	L	F	H	K	M	T	D	D	P	M	N	N	K	D	V	K	K	S	H	G	K	M	W	S	Y	G	F	Y	L	I	H	L	Q	G	K	Q	G	F	Q	F	F	C
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	X	I	C	C	K	S	N	H	G	Q	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F	X	R	K	V	Q	I	N	D	K	D	D	T	N	E	Y	K	H	A	F	E	I	I	L	K	D	E	N	S	V	I	F	S	A
Template Known Secondary structure		.	.	.	.	T	T		S	S								S	S									T	T					T	T	S				S									S		S									S	S	S			S							T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	E	D	M	K	R	K	W	M	E	Q	F	E	M	A	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	A	E	E	K	N	N	W	X	A	A	L	I	S	L	Q	Y
Template Known Secondary structure		S	S																T
Template Predicted Secondary structure
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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